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AgenaRisk - http://www.agenarisk.com
Bayesian network, simulation and risk analysis software. Supports exact and approximate inference in hybrid and dynamic networks for decision support, diagnosis, statistical learning and prediction applications.

BayesBuilder - http://www.snn.ru.nl/nijmegen/index.php3?page=31
A tool for constructing and testing Bayesian networks.

BayesiaLab - http://www.bayesia.com
Bayesian network laboratory producing a broad set of tools for structure learning, analysis, adaptive questionnaires, and dynamic Bayesian networks

Bayesian Knowledge Discoverer - http://www.bayesware.com/
Able to learn Bayesian Belief Networks from (possibly incomplete) databases. Algorithm based on the Bound and Collapse estimation method.

Bayesian Network Toolbox (BNT) - http://www.ai.mit.edu/~murphyk/Software/BNT/bnt.html
Kevin Murphy's MATLAB toolbox - supports dynamic BNs, decision networks, many exact and approximate inference algorithms, parameter estimation, and structure learning

Bayesian Network tools in Java (BNJ) - http://bnj.sourceforge.net
Open-source suite of software tools for research and development using graphical models of probability, published by Kansas State University Laboratory for Knowledge Discovery in Databases (KDD)

Bayesline - http://bayesline.sourceforge.net
Very generic and free (LGPL) Belief Network Framework in C++ - supports a broad range of knowledge and dependency types for network variables and clusters of variables

Belief Net Power Constructor - http://www.cs.ualberta.ca/~jcheng/bnpc.htm
System based on Jie Cheng's three-phase belief network construction algorithm. Includes a wizard-like user interface and a belief network construction engine.

BNet Desktop Software and Developer Toolkits - http://www.cra.com/bnet
BNet.Builder is a belief network software application. BNet.EngineKit provides an embeddable engine.

BUGS - Bayesian inference Using Gibbs Sampling - http://www.mrc-bsu.cam.ac.uk/bugs/
Bayesian analysis of complex statistical models using Markov chain Monte Carlo (MCMC) methods.

Charles River Analytics, Inc. - http://www.cra.com/commercial-products-services/belief-network-modeling.asp
BNet™.Builder is a desktop application for rapidly creating Belief Networks, entering information, and getting results. BNet.EngineKit is a developer toolkit for researchers and engineers to use to embed belief networks in software applications.

CleverSet, Inc. - http://www.cleverset.com
Develops and exploits proprietary Relational Bayesian Modeling (RBM) technology and applications that provide real-time, actionable results from large amounts of dynamic, multi-faceted, ambiguous information.

Complex Systems Computation Group (CoSCo) - http://cosco.hiit.fi
BAYDA software implements Bayesian predictive discriminant analysis, where the aim is to build a model for predicting the value of one discrete (class, group, category) variable using other variables.

DecsionQ Bayesian Predictive Analysis Software - http://www.decisionq.com
A data mining software company that has a fully automated data modeling and predictive analytics package.

Ergo - http://www.noeticsystems.com/ergo/
A Bayesian network editor and solver. [Windows/Macintosh]

Genie/Smile - http://www2.sis.pitt.edu/~genie/
GeNIe is a development environment for building graphical decision-theoretic models running under Windows operating systems. SMILE is its portable inference engine, consisting of a library of C++ classes, currently compiled for Windows, Solaris and Linux.

HUGIN EXPERT - Hugin - http://www.hugin.com/
Developers of the Hugin tool

Intel's Open Source Networks Library - http://www.intel.com/technology/computing/pnl/
PNL is a full function, free, open source, graphical models library released under a BSD style license.

JavaBayes - http://www.cs.cmu.edu/~javabayes/Home/
Bayesian networks in Java.

Kevin Murphy's list of Bayesian network software - http://www.ai.mit.edu/~murphyk/Software/bnsoft.html
Most up-to-date list available.

Knowledge Industries, Inc. - http://www.kic.com
Builds and licenses diagnostic software based upon Bayesian Belief Networks for medical, industrial and management applications. Software includes editors/compilers, test/review tools and inference engines embeddable in stand-alone and web-based applications.

Lumina Decision Systems - http://www.lumina.com/
Makers of Analytica, visual software tool for creating, analyzing, and communicating quantitative business models.

Microsoft Belief Network Tools - http://www.research.microsoft.com/dtas/msbn/default.htm
Free Windows software for creation, assessment and evaluation of belief networks.

MIM - http://www.hypergraph.dk/
Windows program for graphical modelling.

Norsys Software Corp. - http://www.norsys.com/netica.html
Netica is a complete program for working with belief networks and influence diagrams. Feature compiles belief (Bayesian) networks into a junction tree of cliques for fast probabilistic reasoning.

Pulcinella - http://iridia.ulb.ac.be/pulcinella/Welcome.html
Tool for propagating uncertainty through local computations based on the general framework of valuation systems proposed by Shenoy and Shafer.

RISO - http://riso.sourceforge.net
Robert Dodier's open source package for distributed, heterogeneous belief networks in Java - allows different conditional distributions

SamIam: Sensitivity Analysis, Modeling, Inference and More - http://reasoning.cs.ucla.edu/samiam/
A tool for modeling and reasoning with Bayesian networks, developed in Java by the Automated Reasoning Group of Professor Adnan Darwiche at UCLA.

WebWEavr-III - http://www.cis.uoguelph.ca/~yxiang/ww3/
WEBWEAVR-III is a Java application that supports the construction of Bayesian networks, inference in standard and dynamic Bayesian networks and decomposable Markov networks, construction and verification of multiply-sectioned Bayesian networks (MSBNs), inference in multi-agent MSBNs, and learning decomposable Markov networks.

XBAIES - http://www.staff.city.ac.uk/~rgc/webpages/xbpage.html
Rob Cowell's windows-based system for bayesian network inference and learning.

XML Belief Network File Format - http://www.research.microsoft.com/dtas/bnformat/
Proposed XML standard for describing Bayesian belief networks.

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